Biochemistry : Biochemistry

Study concepts, example questions & explanations for Biochemistry

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Example Questions

Example Question #6 : Other Hormone Pathways

Erythropoietin is an important glycoprotein in the human body. What is the function of erythropoietin?

Possible Answers:

Stimulates secretion in the tubules of the nephron

Stimulates red blood cell destruction

Stimulates production of red blood cells

Stimulates filtering in the kidney

Stimulates white blood cell activity

Correct answer:

Stimulates production of red blood cells

Explanation:

Erythropoietin is a glycoprotein hormone produced in the kidney that stimulates the production of red blood cells in the bone marrow.

Example Question #7 : Other Hormone Pathways

Which hormone below would result in an increase in cAMP?

Possible Answers:

Epinephrine

Insulin

Human growth hormone

None of these

Epidermal growth factor

Correct answer:

Epinephrine

Explanation:

Epinephrine and glucagon are examples of hormones that affect G protein-coupled receptors like adenylate cyclase and increase levels of cAMP. The other hormones listed affect receptor tyrosine kinases and non-receptor tyrosine kinases.

Example Question #1 : Other Hormone Pathways

Which of the following hormones crosses the plasma membrane in order to affect its target cell?

Possible Answers:

Insulin

Glucagon

None of these hormones act by crossing the plasma membrane

Thyroxine

Epinephrine

Correct answer:

Thyroxine

Explanation:

This question is asking us to identify a hormone that passes through the target cell's plasma membrane in order to affect that cell.

When looking at hormones, there are three general types: amine, peptide, and steroid. Out of these, steroid hormones are all capable of crossing the plasma membrane. In fact, the receptors for steroid hormones are often found in the cytoplasm or nucleus of the target cell. Generally, amine and peptide hormones act by binding to a receptor on the outer surface of the target cell's plasma membrane. However, thyroxine is an exception. Thyroxine is an amine hormone based off of the amino acid tyrosine. Normally, amine-derived hormones do not cross the plasma membrane, but the largely hydrophobic nature of thyroxine allows it to cross the plasma membrane and bind with its intracellular receptor.

Of the other answer choices shown, none of them cross the cell membrane. Epinephrine is an amine-derived hormone, utilizing tyrptophan as the starting material. Insulin, glucagon, and growth hormones are all peptide hormones.

Example Question #9 : Other Hormone Pathways

Which of the following is a polypeptide?

Possible Answers:

Pyridoxal phosphate

Biotin

Epinephrine

Glucagon

Correct answer:

Glucagon

Explanation:

Glucagon is a short peptide hormone involved in triggering signal cascades in response to low blood glucose. Biotin, also known as vitamin B7, is a cofactor in fatty acid synthesis. Pyridoxal phosphate, the activated form of vitamin B6, is a cofactor in transamination reactions, among others. Epinephrine is a steroid hormone involved in the fight or flight response.

Example Question #1 : Anabolic Pathways And Synthesis

Which of the following statements is false about the human genome?

Possible Answers:

Paralogs are homologous gene sequences caused by duplication events within the genome

There are about 20,000 proteins that are coded for by the genome

None of the other answers are false

The sequences which code for proteins make up about 2% of the genome

Repeated sequences make up about 5% of the genome

Correct answer:

Repeated sequences make up about 5% of the genome

Explanation:

Scientists have indeed counted about 20,000 proteins coded for by the genome. Coding sequences are only about 2% or less of the genome. The definition of paralogs is genes related by duplication within a genome. Within the genome, not about 5%, but rather about 50%, of DNA sequences are repeated.

Example Question #1 : Anabolic Pathways And Synthesis

Where does the pentose phosphate pathway primarily take place? 

Possible Answers:

The brush border of the small intestine

The cytosol of the liver

The mitochondria of the kidney

The mitochondria of the liver

Correct answer:

The cytosol of the liver

Explanation:

The pentose phosphate pathway (also known as the hexose monophosphate shunt or HMS), which mainly serves to produce  for anabolic reduction reactions and ribose-5-phosphate for nucleic acid production, takes place in the cytosol of hepatic cells.

Example Question #3 : Anabolic Pathways And Synthesis

Which of the following amino acids can be created from the carbon skeleton of oxaloacetate?

Possible Answers:

Valine

Methionine

Histidine

Leucine

Glutamine

Correct answer:

Methionine

Explanation:

From the carbon skeleton of oxaloacetate, methionine can be created.  However, glutamine comes from alpha ketoglutarate, valine and leucine come from pyruvate, and histidine comes from ribose-5-phosphate.

Example Question #4 : Anabolic Pathways And Synthesis

Which of the following molecules is not necessary to create glutamate from alpha-ketoglutarate?

Possible Answers:

NADPH

ATP

Alpha-ketoglutarate

Carbon dioxide

Correct answer:

Carbon dioxide

Explanation:

The reaction for the conversion of glutamine into glutamate is:

As seen in the reaction above, carbon dioxide is uninvolved.

Example Question #3 : Anabolic Pathways And Synthesis

Which of the following correctly lists the severity of damage done by mutations in DNA from most severe to least?

Possible Answers:

Nonsense, silent, missense 

Nonsense, missense, silent

Silent, missense, nonsense

Missense, nonsense, silent

Correct answer:

Nonsense, missense, silent

Explanation:

When a change results in an early stop codon, nonsense mutation occurs and the protein is done being read early, often resulting in a nonfunctional protein. When a base change results into a different amino acid, this is a missense mutation. When a base change occurs but results in the same amino acid being read, this is considered a silent mutation. 

Example Question #2 : Protein Synthesis

Which of the following correctly describes the function of a signal sequence with respect to proteins?

Possible Answers:

Allows the protein or peptide to act as a signaling molecule by recognizing its associated receptor

Allows the protein to be recognized by the ubiquitination pathway for degradation

Transports proteins that are destined for the secretory pathway within cells

Serves as a signal for chaperone proteins to help fold the protein into the correct conformation

Marks the protein to be destined inside the nucleus

Correct answer:

Transports proteins that are destined for the secretory pathway within cells

Explanation:

To answer this question, it's essential to have an understanding of what a signal sequence is.

A signal sequence (also sometimes called a signal peptide) is a specific sequence of amino acids on a polypeptide that appears near the beginning of translation. When this signal sequence is present, it causes a temporary halt in the translation process. Meanwhile, another protein called a signal recognition particle (SRP) comes along and binds to the ribosome that is translating the polypeptide. Together, this polypeptide-ribosome-SRP complex is transferred from the cytosol to the surface of the endoplasmic reticulum (ER). Once there, the complex allows the polypeptide to resume synthesis, but in doing so, causes it to be synthesized into the inner lumen of the endoplasmic reticulum. Consequently, this polypeptide will go on to be modified within the ER and also the Golgi apparatus. Afterwards, it will be sent off within a vesicle, where is will either be A) secreted outside of the cell or B) incorporated into the endomembrane system of the cell (in other words, the peptide will be inserted into a membrane such as the plasma membrane, ER membrane, Golgi membrane, etc.). Lastly, it is the nuclear localization sequence (NLS) that, when added to a protein, allows it to enter the nucleus through the nuclear membrane.

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