"The Place of Lesion Studies in Neuroscience" by Samantha Winter (2013)

It’s easy to forget that the study of neuroscience originated from non-normalized, non-statistically appraised methods like lesion studies. It’s equally easy, with the advent of sophisticated technology, to render such a method obsolete. A small group of neuroscientists today make a case for the reinstitution of lesion studies—the study of abnormal brains with damaged regions in order to better understand the brain—into the twenty-first-century cognitive neuroscience realm. Their suggestion is bold, but their argument is justified.

Cognitive neuroscientists advocate for the use of convergent methods. Many of them argue that with the limitations of our existing techniques, convergent evidence is imperative for sound research. If this is the case, why ignore a method that has potential for implying causality in a domain dominated by correlational research? Rather than advocating for a single method, neuroscientists should take their own advice and use convergent techniques. Sound research should combine a variety of techniques to examine both causal relationships and overcome the individual shortcomings of each method through the use of many.

Lesion studies are also significantly more beneficial now than they were in earlier times. Neuroimaging methods have enhanced our understanding of what contributes to the brain problems most often encountered, and more refined experiments have been developed to confirm the findings from the more unreliable lesion studies. This transformation allows lesion studies to be included alongside the other systems as a mechanism for understanding the human brain.

The author would most likely agree with which of the following statements?

"The Cell Cycle" by Joseph Ritchie (2014)

The process by which cells divide and multiply is known as the cell cycle. This cycle consists of two main phases: interphase and mitosis. Each phase consists of a series of clearly defined and observable steps. At the conclusion of the cycle, each parent cell produces two genetically identical daughter cells that may also replicate by proceeding through the cell cycle.

Roughly ninety percent of the cell cycle is spent in interphase. Interphase is comprised of three main steps: the first gap phase, the synthesis phase (also called "S phase"), and the second gap phase. The initial gap phase is a period of cellular preparation in which the cell increases in size and readies itself for DNA synthesis. In the synthesis phase, or S phase, DNA replication occurs, so that when the cell divides, each daughter cell will have the DNA necessary to function properly. In the second gap phase, the cell grows in size and prepares for cellular division in the mitotic phase. At the end of each gap phase, the cell has to pass a regulatory checkpoint to ensure that nothing is going wrong. If anything has gone wrong, the checkpoints stop the cell from proceeding through the cell cycle any further.

The next part of the cell cycle is mitosis. Mitosis is a form of cell division and is broken down into five distinct phases. During prophase, the genetic material contained in the cell’s chromatin condenses into distinct chromosomes. Prometaphase is marked by the breakdown of the cell’s nuclear envelope and the formation of centrosomes at the poles of the cell. During metaphase, the cell’s chromosomes are moved to the center of the cell. A checkpoint ensures that the chromosomes are properly aligned on the center and halts the cell cycle if any errors have occurred. In anaphase, chromosomes break apart at their center, or centromere, and sister chromatids move to opposite ends of the cell. Lastly, telophase and cytokinesis occur as nuclear membranes form to physically divide the cell into two new daughter cells. Chromosomes also unwind into loose chromatin during this part of mitosis. Cytokinesis is defined as the division of the each cell’s cytoplasm and organelles. At the conclusion of the cell cycle, two genetically identical daughter cells have formed.

The cell cycle operates by a series of checkpoints and external cues. This system of checks enables the cell to enter a state of dormancy known as the gap zero phase when conditions or other factors inhibit the cell cycle. Conversely, unregulated and uncontrolled cellular division can occur under certain circumstances. A cell in a state of uncontrolled division is known to be cancerous. Lastly, cells have the ability to mediate their own death by way of apoptosis if certain genetic or physical abnormalities exist. The cell cycle is a complex process that enables cells to replicate and proliferate under a stringent set of checks and balances that produce healthy and viable daughter cells that are each able to perform the process in the future.

About how much time does a cell spend undergoing mitosis in the cell cycle?

Adapted from Volume Four of The Natural History of Animals: The Animal Life of the World in Its Various Aspects and Relations by James Richard Ainsworth Davis (1903)

The examples of protective resemblance so far quoted are mostly permanent adaptations to one particular sort of surrounding. There are, however, numerous animals which possess the power of adjusting their color more or less rapidly so as to harmonize with a changing environment.

Some of the best known of these cases are found among those mammals and birds that inhabit countries more or less covered with snow during a part of the year. A good instance is afforded by the Irish or variable hare, which is chiefly found in Ireland and Scotland. In summer, this looks very much like an ordinary hare, though rather grayer in tint and smaller in size, but in winter it becomes white with the exception of the black tips to the ears. Investigations that have been made on the closely allied American hare seem to show that the phenomenon is due to the growth of new hairs of white hue. 

The common stoat is subject to similar color change in the northern parts of its range. In summer it is of a bright reddish brown color with the exception of the under parts, which are yellowish white, and the end of the tail, which is black. But in winter, the entire coat, save only the tip of the tail, becomes white, and in that condition the animal is known as an ermine. A similar example is afforded by the weasel. The seasonal change in the vegetarian Irish hare is purely of protective character, but in such an actively carnivorous creature as a stoat or weasel, it is aggressive as well, rendering the animal inconspicuous to its prey.

What can we infer preceded this paragraph?

Adapted from Volume Four of The Natural History of Animals: The Animal Life of the World in Its Various Aspects and Relations by James Richard Ainsworth Davis (1903)

The examples of protective resemblance so far quoted are mostly permanent adaptations to one particular sort of surrounding. There are, however, numerous animals which possess the power of adjusting their color more or less rapidly so as to harmonize with a changing environment.

Some of the best known of these cases are found among those mammals and birds that inhabit countries more or less covered with snow during a part of the year. A good instance is afforded by the Irish or variable hare, which is chiefly found in Ireland and Scotland. In summer, this looks very much like an ordinary hare, though rather grayer in tint and smaller in size, but in winter it becomes white with the exception of the black tips to the ears. Investigations that have been made on the closely allied American hare seem to show that the phenomenon is due to the growth of new hairs of white hue. 

The common stoat is subject to similar color change in the northern parts of its range. In summer it is of a bright reddish brown color with the exception of the under parts, which are yellowish white, and the end of the tail, which is black. But in winter, the entire coat, save only the tip of the tail, becomes white, and in that condition the animal is known as an ermine. A similar example is afforded by the weasel. The seasonal change in the vegetarian Irish hare is purely of protective character, but in such an actively carnivorous creature as a stoat or weasel, it is aggressive as well, rendering the animal inconspicuous to its prey.

Based on the passage, what can we infer about the weasel?

Adapted from Essays on Early Ornithology and Kindred Subjects by James R. McClymont (1920)

The voyagers named it the Angra de Santa Elena, and it may have been the bay which is now known as St. Helen’s Bay. But it is worthy of note that the G. de Sta. Ellena of the Cantino Chart is laid down in a position which corresponds rather with that of Table Bay than with that of St. Helen’s Bay.

The Portuguese came into contact with the inhabitants of the country adjacent to the anchorage. These people had tawny complexions, and carried wooden spears tipped with horn—assagais of a kind—and bows and arrows. They also used foxes’ tails attached to short wooden handles. We are not informed for what purposes the foxes’ tails were used. Were they used to brush flies away, or were they insignia of authority? The food of the natives was the flesh of whales, seals, and antelopes (gazellas), and the roots of certain plants. Crayfish or ‘Cape lobsters’ abounded near the anchorage.

The author of the roteiro affirms that the birds of the country resembled the birds in Portugal, and that amongst them were cormorants, larks, turtle-doves, and gulls. The gulls are called "guayvotas," but "guayvotas" is probably another instance of the eccentric orthography of the author and equivalent to "gaivotas."

In December the squadron reached the Angra de São Bràs, which was either Mossel Bay or another bay in close proximity to Mossel Bay. Here penguins and seals were in great abundance. The author of the roteiro calls the penguins "sotelycairos," which is more correctly written "sotilicarios" by subsequent writers. The word is probably related to the Spanish "sotil" and the Latin "subtilis," and may contain an allusion to the supposed cunning of the penguins, which disappear by diving when an enemy approaches.

The sotilicarios, says the chronicler, could not fly because there were no quill-feathers in their wings; in size they were as large as drakes, and their cry resembled the braying of an ass. Castanheda, Goes, and Osorio also mention the sotilicario in their accounts of the first voyage of Vasco da Gama, and compare its flipper to the wing of a bat—a not wholly inept comparison, for the under-surface of the wings of penguins is wholly devoid of feathery covering. Manuel de Mesquita Perestrello, who visited the south coast of Africa in 1575, also describes the Cape penguin. From a manuscript of his Roteiro in the Oporto Library, one learns that the flippers of the sotilicario were covered with minute feathers, as indeed they are on the upper surface and that they dived after fish, upon which they fed, and on which they fed their young, which were hatched in nests constructed of fishbones. There is nothing to cavil at in these statements, unless it be that which asserts that the nests were constructed of fishbones, for this is not in accordance with the observations of contemporary naturalists, who tell us that the nests of the Cape Penguin (Spheniscus demersus) are constructed of stones, shells, and debris. It is, therefore, probable that the fishbones which Perestrello saw were the remains of repasts of seals.

Seals, says the roteiro, were in great number at the Angra de São Bràs. On one occasion the number was counted and was found to be three thousand. Some were as large as bears and their roaring was as the roaring of lions. Others, which were very small, bleated like kids. These differences in size and in voice may be explained by differences in the age and in the sex of the seals, for seals of different species do not usually resort to the same locality. The seal which formerly frequented the south coast of Africa—for it is, I believe, no longer a denizen of that region—was that which is known to naturalists as Arctocephalus delalandii, and, as adult males sometimes attain eight and a half feet in length, it may well be described as of the size of a bear. Cubs from six to eight months of age measure about two feet and a half in length. The Portuguese caught anchovies in the bay, which they salted to serve as provisions on the voyage. They anchored a second time in the Angra de São Bràs in March, 1499, on their homeward voyage.

Yet one more allusion to the penguins and seals of the Angra de São Bràs is of sufficient historical interest to be mentioned. The first Dutch expedition to Bantam weighed anchor on the 2nd of April, 1595, and on the 4th of August of the same year the vessels anchored in a harbor called "Ague Sambras," in eight or nine fathoms of water, on a sandy bottom. So many of the sailors were sick with scurvy—"thirty or thirty-three," said the narrator, "in one ship"—that it was necessary to find fresh fruit for them. "In this bay," runs the English translation of the narrative, "lieth a small Island wherein are many birds called Pyncuins and sea Wolves that are taken with men’s hands." In the original Dutch narrative by Willem Lodewyckszoon, published in Amsterdam in 1597, the name of the birds appears as "Pinguijns."

It can reasonably be inferred from the passage that which of the following is true?

Adapted from Essays on Early Ornithology and Kindred Subjects by James R. McClymont (1920)

The voyagers named it the Angra de Santa Elena, and it may have been the bay which is now known as St. Helen’s Bay. But it is worthy of note that the G. de Sta. Ellena of the Cantino Chart is laid down in a position which corresponds rather with that of Table Bay than with that of St. Helen’s Bay.

The Portuguese came into contact with the inhabitants of the country adjacent to the anchorage. These people had tawny complexions, and carried wooden spears tipped with horn—assagais of a kind—and bows and arrows. They also used foxes’ tails attached to short wooden handles. We are not informed for what purposes the foxes’ tails were used. Were they used to brush flies away, or were they insignia of authority? The food of the natives was the flesh of whales, seals, and antelopes (gazellas), and the roots of certain plants. Crayfish or ‘Cape lobsters’ abounded near the anchorage.

The author of the roteiro affirms that the birds of the country resembled the birds in Portugal, and that amongst them were cormorants, larks, turtle-doves, and gulls. The gulls are called "guayvotas," but "guayvotas" is probably another instance of the eccentric orthography of the author and equivalent to "gaivotas."

In December the squadron reached the Angra de São Bràs, which was either Mossel Bay or another bay in close proximity to Mossel Bay. Here penguins and seals were in great abundance. The author of the roteiro calls the penguins "sotelycairos," which is more correctly written "sotilicarios" by subsequent writers. The word is probably related to the Spanish "sotil" and the Latin "subtilis," and may contain an allusion to the supposed cunning of the penguins, which disappear by diving when an enemy approaches.

The sotilicarios, says the chronicler, could not fly because there were no quill-feathers in their wings; in size they were as large as drakes, and their cry resembled the braying of an ass. Castanheda, Goes, and Osorio also mention the sotilicario in their accounts of the first voyage of Vasco da Gama, and compare its flipper to the wing of a bat—a not wholly inept comparison, for the under-surface of the wings of penguins is wholly devoid of feathery covering. Manuel de Mesquita Perestrello, who visited the south coast of Africa in 1575, also describes the Cape penguin. From a manuscript of his Roteiro in the Oporto Library, one learns that the flippers of the sotilicario were covered with minute feathers, as indeed they are on the upper surface and that they dived after fish, upon which they fed, and on which they fed their young, which were hatched in nests constructed of fishbones. There is nothing to cavil at in these statements, unless it be that which asserts that the nests were constructed of fishbones, for this is not in accordance with the observations of contemporary naturalists, who tell us that the nests of the Cape Penguin (Spheniscus demersus) are constructed of stones, shells, and debris. It is, therefore, probable that the fishbones which Perestrello saw were the remains of repasts of seals.

Seals, says the roteiro, were in great number at the Angra de São Bràs. On one occasion the number was counted and was found to be three thousand. Some were as large as bears and their roaring was as the roaring of lions. Others, which were very small, bleated like kids. These differences in size and in voice may be explained by differences in the age and in the sex of the seals, for seals of different species do not usually resort to the same locality. The seal which formerly frequented the south coast of Africa—for it is, I believe, no longer a denizen of that region—was that which is known to naturalists as Arctocephalus delalandii, and, as adult males sometimes attain eight and a half feet in length, it may well be described as of the size of a bear. Cubs from six to eight months of age measure about two feet and a half in length. The Portuguese caught anchovies in the bay, which they salted to serve as provisions on the voyage. They anchored a second time in the Angra de São Bràs in March, 1499, on their homeward voyage.

Yet one more allusion to the penguins and seals of the Angra de São Bràs is of sufficient historical interest to be mentioned. The first Dutch expedition to Bantam weighed anchor on the 2nd of April, 1595, and on the 4th of August of the same year the vessels anchored in a harbor called "Ague Sambras," in eight or nine fathoms of water, on a sandy bottom. So many of the sailors were sick with scurvy—"thirty or thirty-three," said the narrator, "in one ship"—that it was necessary to find fresh fruit for them. "In this bay," runs the English translation of the narrative, "lieth a small Island wherein are many birds called Pyncuins and sea Wolves that are taken with men’s hands." In the original Dutch narrative by Willem Lodewyckszoon, published in Amsterdam in 1597, the name of the birds appears as "Pinguijns."

Based on the first text the author describes, the probable reason for the name given to the penguins was to __________.

Adapted from "Recent Views as to Direct Action of Light on the Colors of Flowers and Fruits" in Tropical Nature, and Other Essays by Alfred Russel Wallace (1878)

The theory that the brilliant colors of flowers and fruits is due to the direct action of light has been supported by a recent writer by examples taken from the arctic instead of from the tropical flora. In the arctic regions, vegetation is excessively rapid during the short summer, and this is held to be due to the continuous action of light throughout the long summer days. "The further we advance towards the north, the more the leaves of plants increase in size as if to absorb a greater proportion of the solar rays. M. Grisebach says that during a journey in Norway he observed that the majority of deciduous trees had already, at the 60th degree of latitude, larger leaves than in Germany, while M. Ch. Martins has made a similar observation as regards the leguminous plants cultivated in Lapland.” The same writer goes on to say that all the seeds of cultivated plants acquire a deeper color the further north they are grown, white haricots becoming brown or black, and white wheat becoming brown, while the green color of all vegetation becomes more intense. The flowers also are similarly changed: those which are white or yellow in central Europe becoming red or orange in Norway. This is what occurs in the Alpine flora, and the cause is said to be the same in both—the greater intensity of the sunlight. In the one the light is more persistent, in the other more intense because it traverses a less thickness of atmosphere.

Admitting the facts as above stated to be in themselves correct, they do not by any means establish the theory founded on them; and it is curious that Grisebach, who has been quoted by this writer for the fact of the increased size of the foliage, gives a totally different explanation of the more vivid colors of Arctic flowers. He says, “We see flowers become larger and more richly colored in proportion as, by the increasing length of winter, insects become rarer, and their cooperation in the act of fecundation is exposed to more uncertain chances.” (Vegetation du Globe, col. i. p. 61—French translation.) This is the theory here adopted to explain the colors of Alpine plants, and we believe there are many facts that will show it to be the preferable one. The statement that the white and yellow flowers of temperate Europe become red or golden in the Arctic regions must we think be incorrect. By roughly tabulating the colors of the plants given by Sir Joseph Hooker as permanently Arctic, we find among fifty species with more or less conspicuous flowers, twenty-five white, twelve yellow, eight purple or blue, three lilac, and two red or pink; showing a very similar proportion of white and yellow flowers to what obtains further south.

What role does the underlined sentence play in the passage as a whole?

Adapted from "Recent Views as to Direct Action of Light on the Colors of Flowers and Fruits" in Tropical Nature, and Other Essays by Alfred Russel Wallace (1878)

The theory that the brilliant colors of flowers and fruits is due to the direct action of light has been supported by a recent writer by examples taken from the arctic instead of from the tropical flora. In the arctic regions, vegetation is excessively rapid during the short summer, and this is held to be due to the continuous action of light throughout the long summer days. "The further we advance towards the north, the more the leaves of plants increase in size as if to absorb a greater proportion of the solar rays. M. Grisebach says that during a journey in Norway he observed that the majority of deciduous trees had already, at the 60th degree of latitude, larger leaves than in Germany, while M. Ch. Martins has made a similar observation as regards the leguminous plants cultivated in Lapland.” The same writer goes on to say that all the seeds of cultivated plants acquire a deeper color the further north they are grown, white haricots becoming brown or black, and white wheat becoming brown, while the green color of all vegetation becomes more intense. The flowers also are similarly changed: those which are white or yellow in central Europe becoming red or orange in Norway. This is what occurs in the Alpine flora, and the cause is said to be the same in both—the greater intensity of the sunlight. In the one the light is more persistent, in the other more intense because it traverses a less thickness of atmosphere.

Admitting the facts as above stated to be in themselves correct, they do not by any means establish the theory founded on them; and it is curious that Grisebach, who has been quoted by this writer for the fact of the increased size of the foliage, gives a totally different explanation of the more vivid colors of Arctic flowers. He says, “We see flowers become larger and more richly colored in proportion as, by the increasing length of winter, insects become rarer, and their cooperation in the act of fecundation is exposed to more uncertain chances.” (Vegetation du Globe, col. i. p. 61—French translation.) This is the theory here adopted to explain the colors of Alpine plants, and we believe there are many facts that will show it to be the preferable one. The statement that the white and yellow flowers of temperate Europe become red or golden in the Arctic regions must we think be incorrect. By roughly tabulating the colors of the plants given by Sir Joseph Hooker as permanently Arctic, we find among fifty species with more or less conspicuous flowers, twenty-five white, twelve yellow, eight purple or blue, three lilac, and two red or pink; showing a very similar proportion of white and yellow flowers to what obtains further south.

The author brings up Joseph Hooker’s research in order to __________.

"The Multiple Sides of Computer Science" by Matthew Minerd (2014)

It often takes some time for a new discipline to become recognized as an independent science. An excellent example of this is computer science. In many ways, this science still is a hodgepodge of several different sciences, each one having its own distinct character. For example, some computer scientists are almost indistinguishable from mathematicians. Many of the most difficult topics in pattern recognition and data communications require intensive mathematics in order to provide software solutions. Years of training in the appropriate disciplines are necessary before the computer scientist can even begin to work as a programmer in such areas. In contrast to those computer scientists who work with complex mathematics, many computer scientists work on areas of hardware development that are similar to disciplines like electrical engineering and physics.

However, computer science has its own particular problems regarding the unity of its subject matter. There are many practical applications for computing work; therefore, many computer scientists focus on learning a large set of skills in programming languages, development environments, and even information technology. All of these disciplines have a certain practical coloration that is quite distinct from the theoretical concepts used in other parts of the field. Nevertheless, these practical topics add to the broad range of topics covered by most academic programs that claim to focus on “computer science.” It can only be hoped that these disciplines will increase in orderliness in the coming decades.

Which of the following topics would not be a good example to add to the second paragraph?

Adapted from An Introduction to Astronomy by Forest Ray Moulton (1916 ed.)

It is doubtful if any important scientific idea ever sprang suddenly into the mind of a single man. The great intellectual movements in the world have had long periods of preparation, and often many men were groping for the same truth, without exactly seizing it, before it was fully comprehended.

The foundation on which all science rests is the principle that the universe is orderly, and that all phenomena succeed one another in harmony with invariable laws. Consequently, science was impossible until the truth of this principle was perceived, at least as applied to a limited part of nature.

The phenomena of ordinary observation, as, for example, the weather, depend on such a multitude of factors that it was not easy for men in their primitive state to discover that they occur in harmony with fixed laws. This was the age of superstition, when nature was supposed to be controlled by a great number of capricious gods whose favor could be won by childish ceremonies. Enormous experience was required to dispel such errors and to convince men that the universe is one vast organization whose changes take place in conformity with laws which they can in no way alter.

The actual dawn of science was in prehistoric times, probably in the civilizations that flourished in the valleys of the Nile and the Euphrates. In the very earliest records of these people that have come down to modern times it is found that they were acquainted with many astronomical phenomena and had coherent ideas with respect to the motions of the sun, moon, planets, and stars. It is perfectly clear from their writings that it was from their observations of the heavenly bodies that they first obtained the idea that the universe is not a chaos. Day and night were seen to succeed each other regularly, the moon was found to pass through its phases systematically, the seasons followed one another in order, and in fact the more conspicuous celestial phenomena were observed to occur in an orderly sequence. It is to the glory of astronomy that it first led men to the conclusion that law reigns in the universe.

Which of the following is the best image for the author’s view of the universe?