GRE Subject Test: Biochemistry, Cell, and Molecular Biology : RNA, Transcription, and Translation

Study concepts, example questions & explanations for GRE Subject Test: Biochemistry, Cell, and Molecular Biology

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Example Questions

Example Question #3 : Translation And Proteins

Which of the following most accurately describes the chronological order of ribosome biogenesis in eukaryotes?

Possible Answers:

Ribosomal proteins are translated in the nucleous and transported to the cytoplasm. At the same time, rRNA genes are being rapidly transcribed in the nucleolus. rRNA and ribosomal proteins form the 60S and 40S subunits in the cytoplasm, where they join to form a functional ribosome. 

Ribosomal proteins are translated in the cytoplasm and transported to the nucleolus. At the same time, rRNA genes are being rapidly transcribed in the nucleolus. rRNA and ribosomal proteins form the 60S and 40S subunits in the nucleolus and are then transported to the cytoplasm for functional ribosome assembly. 

Ribosomal proteins are translated in the cytoplasm and transported to the nucleolus. At the same time, rRNA genes are being rapidly transcribed in the cytoplasm. rRNA and ribosomal proteins form the 60S and 40S subunits in the cytoplasm. 

Ribosomal proteins are translated in the cytoplasm and transported to the nucleolus. At the same time, rRNA genes are being rapidly transcribed in the nucleolus. rRNA and ribosomal proteins form the 50S and 30S subunits in the nucleolus and are then transported to the cytoplasm for functional ribosome assembly. 

Ribosomal proteins are translated in the cytoplasm. At the same time, rRNA genes are being rapidly transcribed in the nucleolus. rRNA is transported to the cytoplasm where the rRNA and ribosomal proteins form the 60S and 40S ribosomal subunits. 

Correct answer:

Ribosomal proteins are translated in the cytoplasm and transported to the nucleolus. At the same time, rRNA genes are being rapidly transcribed in the nucleolus. rRNA and ribosomal proteins form the 60S and 40S subunits in the nucleolus and are then transported to the cytoplasm for functional ribosome assembly. 

Explanation:

Ribosomal proteins are translated in the cytoplasm and rRNA genes are transcribed in the nucleolus. Following protein translation, these proteins enter the nucleus through nuclear pores and localize to the nucleolus. Here, transcribed rRNA associates with the ribosomal proteins to form the 60S and 40S eukaryotic ribosomal subunits. Prokaryotes have 50S and 30S subunits. The ribosomal subunits then translocate to the cytoplasm where they join together to form fully functional ribosomes. 

Example Question #1 : Translation And Proteins

How many ribosomal binding sites are there and what are their functions? 

Possible Answers:

There are three sites. A site binds peptidyl-tRNA, P site binds aminoacyl-tRNA, E site binds free tRNA before ribosomal exit

There are three sites. A site binds aminoacyl-tRNA, P site binds peptidyl-tRNA, E site binds free tRNA before ribosomal exit

There are two sites. A site binds free tRNA before ribosomal exit, P site binds peptidyl-tRNA 

There are two sites. A site binds free tRNA before ribosomal exit, P site binds aminoacyl-tRNA

There are three sites. A site binds free tRNA before ribosomal exit, P site binds aminoacyl-tRNA, E site binds peptidyl-tRNA 

Correct answer:

There are three sites. A site binds aminoacyl-tRNA, P site binds peptidyl-tRNA, E site binds free tRNA before ribosomal exit

Explanation:

The correct answer is there are three sites. A site binds aminoacyl-tRNA, P site binds peptidyl-tRNA, E site binds free tRNA before ribosomal exit. 

Example Question #31 : Rna, Transcription, And Translation

Which of the following is not a type of modification that can occur after translation?

Possible Answers:

5' capping

Trimming

Proteasomal degradation

Phosphorylation

Correct answer:

5' capping

Explanation:

Post-translational modifications that may occur after a protein is translated include numerous processes to alter the structure or function of the protein. Trimming modification involves removal of the N- or C - terminal propeptides from zymogens to generate mature proteins. Covalent alterations, including phosphorylation, glycosylation and hydroxylation, are frequently used to modify the structure or energy state of a protein. Proteasomal degradation requires the attachment of ubiquitin to defective proteins to tag them for degradation and digestion. Amino acids from degraded proteins can often be recycled to generate new molecules.

5' capping occurs in the nucleus after transcription and is required for transport of RNA out of the nucleus prior to translation.

Example Question #2 : Help With Translation Processes

Which of the following is not a phase in translation?

Possible Answers:

Modification

Initiation

Elongation

Termination

Correct answer:

Modification

Explanation:

There are four phases in translation: activation, initiation, elongation, and termination. Activation is the process that joins the correct amino acid to the correct tRNA. When the tRNA has an amino acid bound to it, it is "charged." Initiation occurs when the small ribosomal subunit binds the 5' end of mRNA, with the help of initiation factors and other proteins. The structure then recruits a methionine tRNA to the start codon to begin the elongation process. Elongation occurs as charged tRNA molecules transfer their amino acids to the growing polypeptide. Termination results when a stop codon is recognized by release factors and the completed protein is released from the ribosome.

Modification of the transcript occurs after translation has been completed.

Example Question #1 : Translation And Proteins

Which of the following ensures that viral gene translation occurs even when host translation is inhibited?

Possible Answers:

Internal Ribosomal Entry Sites (IRES)

5' guanine cap 

5' untranslated region (UTR) 

3' poly-A tail 

Promoter 

Correct answer:

Internal Ribosomal Entry Sites (IRES)

Explanation:

Viruses utilize IRES to allow translation to occur in a 5' cap-independent manner. Translational machinery (ribosomes) are located to the IRES so that translation can occur. 5' guanine cap and 3' poly-A tails are mRNA modifications that are normally necessary to initiate translation, but are cap-dependent. The promoter regulates genes expression on the level of transcription, whereas the 5' UTR regulates translation. 

Example Question #3 : Translation And Proteins

Which amino acid is the "start" amino acid in a peptide chain? 

Possible Answers:

Threonine

Methionine 

Arginine

Lysine

Tyrosine 

Correct answer:

Methionine 

Explanation:

The correct answer is methionine. The ATG codon triplet in a mRNA strand codes for the start of the peptide, and this first amino acid that is coded by ATG is methionine. 

Example Question #31 : Rna, Transcription, And Translation

Most translation occurs by a mRNA cap-dependent mechanism, however, translation can occur by cap-independent initiation. One mechanism by which eukaryotic cells can initiate cap-independent translation is by which of the following approaches? 

Possible Answers:

elF4F initiation complex 

None of these

Poly(A)-binding protein

Internal ribosome entry site

5' mRNA cap

Correct answer:

Internal ribosome entry site

Explanation:

The correct answer is the internal ribosome entry site. This site is a specific nucleotide sequence that allows for translation initiation in the middle of a mRNA sequence, rather than at the 5' end, and does not require the cap-dependent elF4F initiation complex or the 5'cap. The poly(A)-binding protein complexes with the 3' end of mRNA strands during translation initiation via the cap-dependent mechanism. 

Example Question #471 : Gre Subject Test: Biochemistry, Cell, And Molecular Biology

In prokaryotes what site on the mRNA does the ribosome bind to initiate translation?

Possible Answers:

The poly adenine tail

The operator

The promoter

The Shine-Dalgarno sequence

The 3' untranslated region

Correct answer:

The Shine-Dalgarno sequence

Explanation:

The Shine-Dalgarno sequence is the ribosomal binding site in in prokaryotic mRNA that is located around 8 bases upstream of the start codon.

Example Question #32 : Rna, Transcription, And Translation

Which of the level of protein structure is incorrectly matched to its description?

Possible Answers:

Quaternary structure is the three-dimensional structure of a multi-subunit protein

Tertiary structure is the two-dimensional structure of a protein

Secondary structure is determined by hydrogen bonding of the amino acid backbone

Primary structure is the linear amino acid sequence of a protein

Correct answer:

Tertiary structure is the two-dimensional structure of a protein

Explanation:

Primary structure of a protein is determined by covalent peptide bonds, and corresponds to the linear sequence of amino acids before structures begin to form. Secondary structure results from hydrogen bonding between the amino acid backbones to form alpha-helices and beta-sheets. Tertiary structure is formed when functional groups of the amino acids interact, either by hydrogen bonding, hydrophobic interactions, or disulfide bridge formation. Tertiary structure is associated with the three-dimensional structure of a single polypeptide chain. Quaternary structure forms when multiple polypeptide chains interact to build a multi-subunit structure.

Example Question #2 : Help With Protein Structures

Which of the following proteins are likely to contain leucine zipper domains?

Possible Answers:

Transmembrane proteins

Transcription factors

Proteases

Lipases

Correct answer:

Transcription factors

Explanation:

Leucine zippers are domains that allow for the binding of DNA. The question is essentially asking, "which of these proteins are capable of binding DNA?"

Proteases cleave proteins, lipases hydrolyze lipids, and transmembrane proteins interact with membranes. Transcription factors are the only given proteins that bind DNA and, therefore, are much more likely to contain leucine zipper domains than the other options. 

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