GRE Subject Test: Biochemistry, Cell, and Molecular Biology : RNA, Transcription, and Translation

Study concepts, example questions & explanations for GRE Subject Test: Biochemistry, Cell, and Molecular Biology

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All GRE Subject Test: Biochemistry, Cell, and Molecular Biology Resources

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Example Questions

Example Question #41 : Rna, Transcription, And Translation

Which protein structure involves the binding of multiple polypeptides?

Possible Answers:

Tertiary structure

Secondary structure

Primary structure

Quaternary structure

Correct answer:

Quaternary structure

Explanation:

The structures of a protein increase in complexity all the way up to quaternary structure. Primary structure is based on the amino acid sequence of the protein, while secondary and tertiary structures are based on intermolecular attractions between the amino acids in the polypeptide. Quaternary structure is only seen when a functional protein complex is composed of two or more polypeptides bound together.

Example Question #42 : Rna, Transcription, And Translation

Disulfide bonds in proteins are categorized under which structure class? 

Possible Answers:

More than one of these

Secondary structure

Quaternary structure

Primary structure

Tertiary structure

Correct answer:

More than one of these

Explanation:

The correct answer is more than one of these. Primary structure is defined as a succession of amino acids joined by peptide bonds. Secondary structure introduces dimensionality to a protein via hydrogen bonding to produce two predominant structures, alpha helices and beta-pleated sheets. Tertiary structures cause further protein folding by disulfide bonds between cysteines, Van der Waal interactions, and hydrophobic interactions. Quaternary structures involve multiple amino acid chains folding together, and utilize the same types of bonds as tertiary structures. 

Example Question #1 : Help With Protein Functions

The 5' cap on eukaryotic mRNA molecules is recognized by which of the following proteins?

Possible Answers:

40s ribosomal subunit

eIF4e

RNA polymerase

PABP

Correct answer:

eIF4e

Explanation:

The 5' cap is recognized by the important translation factor eIF4e. Once bound, eIF4e helps transport the mRNA molecule to the ribosome and facilitates bonding to the ribosomal machinery.

The 3' poly-A tail is recognized by PABP. RNA polymerase is involved in transcription, not translation. The 40s ribosomal subunit is recruited by the initiation complex (including eIF4e, PABP, and various other translation factors).

Example Question #41 : Rna, Transcription, And Translation

When conducting a stain of chromosomes, certain regions along the chromosome will stain more darkly than the rest. This is due to the fact that these regions are more tightly condensed. What is the functional outcome of having one region more condensed (heterochromatin) than the rest (euchromatin)?

Possible Answers:

Heterochromatin is typically not transcribed/transcribed at a lower rate because the tight packing limits accessibility to polymerases.

Heterochromatin is transcribed at a high frequency because there are a high number of genes in a small area. 

Heterochromatin is not transcribed/is transcribed at a lower rate because euchromatin saturates all available polymerase. 

Heterochromatin does not contain any genes and is a structural component of the chromosome. 

Heterochromatin unpacking requires many ATP and is energetically expensive. 

Correct answer:

Heterochromatin is typically not transcribed/transcribed at a lower rate because the tight packing limits accessibility to polymerases.

Explanation:

Heterochromatin often contains simple, repetitive sequences, and although it cannot be said that it is completely void of coding sequences, it is not typically transcribed. The tight wrapping prevents polymerase from accessing the strand, and euchromatin typically contains the regions that get transcribed. Thus, heterochromatin is though to contain repressed or inactive genes. 

Example Question #3 : Help With Protein Functions

Small GTPases are important molecular switches and signaling pathways. What proteins are responsible for promoting the activation of these small GTPases?

Possible Answers:

Kinases 

Guanine triphosphate

Guanine nucleotide exchange factors 

Nicotinamide adenine dinucleotide

Phosphatases

Correct answer:

Guanine nucleotide exchange factors 

Explanation:

The correct answer is guanine nucleotide exchange factors. In order to activate small GTPases and subsequently stimulate downstream pathways, guanine nucleotide exchange factors bind inactive GTPases and cause the release of guanine diphosphate (GDP). This allows guanine triphosphate (GTP) to bind and active the GTPase. 

Example Question #1 : Help With Post Translational Protein Modification

Which of the following is not an example of post-translational modification?

Possible Answers:

Myristoylation

Alkylation

Polyadenylation

Ubiquitination 

Correct answer:

Polyadenylation

Explanation:

Polyadenylation is an example of post-transcriptional modification. This process involves adding large repeats of adenine bases to the 3' end of mRNA molecules, known as the poly-A tail.

Myristoylation is the process of adding myristate (a fatty acid) to a protein, alkylation is the process of adding an alkyl group, and ubiquination is the process of adding a molecule of ubiquitin (a small protein often used to signal degradation). 

Example Question #1 : Help With Post Translational Protein Modification

In which of the following organelles does the initial linkage of a sugar for post-translation modification N-linked glycosylation most commonly occur?

Possible Answers:

Nucleus

Golgi apparatus

Endoplasmic reticulum

Mitochondria

Correct answer:

Endoplasmic reticulum

Explanation:

Two of the more common types of glycosylation, N-linked and O-linked, occur at different points and in different places in the cell. N-linked glycosylation takes place in the lumen of the endoplasmic reticulum, while O-linked glycosylation takes place in the Golgi body.

The other options, the mitochondria and the nucleus, are not involved in these post-translational modifications.

Example Question #481 : Gre Subject Test: Biochemistry, Cell, And Molecular Biology

Please complete the following statement:

"The addition of a CH3CO group to the N-terminus of a protein is the most common form of protein modification. This chemical modification is called ________."

Possible Answers:

Adenylation

Methylation

Phosphorylation

Ubiquitination

Acetylation

Correct answer:

Acetylation

Explanation:

This question requires knowing either that CH3CO is an acetyl group, or that acetylation is the most common protein modification. Each of the other modifications described are biologically occurring modifications, but acetylation was the correct answer for the given statement. 

All GRE Subject Test: Biochemistry, Cell, and Molecular Biology Resources

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