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Example Questions
Example Question #2 : Other Kinetics Principles
If the level of ATP suddenly increases in a cell, facilitated diffusion in the cell will __________.
increase instantly
remain unchanged
increase slowly
decrease slowly
decrease instantly
remain unchanged
Facilitated diffusion acts independently of the level of intracellular ATP. Therefore, a change in ATP concentration will not affect the rate of facilitated diffusion.
Example Question #4 : Other Kinetics Principles
You make a Hill plot reflecting the binding kinetics of a receptor and see that the slope (the Hill coefficient) is 1. What does this indicate about your receptor?
Binding is positively cooperative
The reaction is proceeding at a rate of
Binding is non-cooperative
The reaction is proceeding at a rate of
Binding is negatively cooperative
Binding is non-cooperative
If the Hill coefficient of the Hill plot is equal to 1, then binding is non-cooperative. If the Hill coefficient is greater than 1, binding is positively cooperative; if less than 1, binding is negatively cooperative. The Hill plot does not make any conclusions about the rate of a reaction, which involves Michaelis-Menten kinetics.
Example Question #3 : Other Kinetics Principles
Given the following kinetic parameters, which of the following enzymes would show the most efficiency?
An enzyme with a value of and a value of
An enzyme with a value of and a value of
An enzyme with a value of and a value of
An enzyme with a value of and a value of
An enzyme with a value of and a value of
An enzyme with a value of and a value of
To answer this question, we need to understand what enzyme efficiency is and how it's calculated.
Enzyme efficiency refers to how much substrate a given enzyme can convert into product for a given amount of substrate. In other words, an enzyme that is very efficient can convert substrate into product very quickly, even when there is not very much of that substrate around.
To calculate an enzyme's efficiency, we need to take into account these two factors by considering the variables they are associated with.
The for a given enzyme represents the "turnover number." This value is a rate constant that is unique to a particular enzyme at a certain temperature (generally under physiological conditions). This rate constant refers to the maximum amount of substrate that an enzyme can convert into product in a given amount of time. Or, put another way, the rate constant gives the maximum reaction rate for a particular enzyme when that enzyme is completely saturated with substrate.
On the other hand, the of an enzyme tells us the amount of substrate that needs to be present in order for the reaction rate to be at exactly half of its maximal value. This is almost the same as saying how much attraction a given enzyme has for its substrate. In fact, under certain conditions, we can use the of an enzyme as an accurate measure of the affinity that the enzyme has for its substrate.
Relating these two values back to enzyme efficiency, we can calculate its value by taking the ratio of the two. In other words,
So, the greater the and the lower the , the greater the enzyme's efficiency will be.
From the answer choices shown, we can see that the ratio is greatest for the enzyme that has a of and a of , which gives an efficiency value of .
Example Question #6 : Other Kinetics Principles
If the chloride concentration is in the cell and in the blood, what is the electrochemical potential of chloride ions across the plasma membrane at when the electrical potential across the membrane is and the inside is negative?
Where is Faraday's constant , is the charge of a chloride ion, which is , and is or . Be sure to keep units consistent.
Example Question #52 : Enzyme Kinetics And Models
Which of the following coenzymes functions primarily by transferring one-carbon groups?
Thiamine pyrophosphate
S-adenosyl methionine
Nicotinamide adenine dinucleotide
Pyridoxal phosphate
Flavin adenine dinucleotide
S-adenosyl methionine
This question is asking us to identify a coenzyme that functions by transferring one-carbon groups. So let's take a look at each answer choice to determine what it does.
Nicotinamide Adenine Dinucleotide () and Flavin Adenine Dinucleotide () both function as carriers of high-energy electrons. Both of these coenzymes are heavily involved in taking high-energy electrons from various compounds as they are broken down during catabolic reactions. Once collected, these coenzymes deposit their high-energy electrons into the electron transport chain, allowing for a great deal of ATP to be generated for energy.
Pyridoxal Phosphate () is a coenzyme that is primarily involved in transamination reactions. These are reactions that take an amino group from amino acids, and transfer that amino group to an alpha-keto acid, converting it into an amino acid in the process. Thus, this coenzyme transfers amino groups.
Thiamine Pyrophosphate () is a coenzyme responsible for transferring two-carbon groups. For instance, serves as a coenzyme for the pyruvate dehydrogenase complex, which is responsible for converting pyruvate into acetyl-CoA.
Finally, S-Adenosyl Methionine () is a coenzyme mainly responsible for transferring one-carbon groups in their most reduced form, as methyl groups. As the most potent methyl group donor in biological systems, functions as a coenzyme for many methyltransferase enzymes.
Example Question #1 : Catabolic Pathways And Metabolism
The urea cycle is vital to the excretion of ammonia, a harmful byproduct of amino acid breakdown.
What enzyme in the urea cycle converts L-ornithine to L-citrulline?
Argininosuccinate synthetase
Ornithine transcarbamylase
Ornithine synthetase
Argininosuccinate lyase
Ornithine transcarbamylase
Ornithine transcarbamylase catalyzes the reaction between the substrates ornithine and carbamoyl phosphate to form citrulline and phosphate. This process occurs primarily in the hepatic mitochondria, and to a lesser extent in the mitochondria of the renal cells.
Example Question #2 : Catabolic Pathways And Metabolism
What enzyme is deficient in Lesch-Nyhan syndrome?
Hypoxanthine-guanine phosphoribosyltransferase (HGPRT)
Uridine phosphorylase
Uridine kinase
Adenine phosphoribosyltransferase (APRT)
Hypoxanthine-guanine phosphoribosyltransferase (HGPRT)
Lesch-Nyhan syndrome is an x-linked deficiency of the enzyme hypoxanthine-guanine phosphoribosyltransferase (HGPRT). HGPRT plays a central role in the generation of purine nucleotides through the purine salvage pathway. Cell breakdown products cannot be reused, and are therefore degraded. This gives rise to increased uric acid, a purine breakdown product. This build-up of uric acid is associated with severe gout and kidney problems, poor muscle control and mental retardation, usually in the first year of life. In the second year of life a common sign is self-mutilating behaviors.
Example Question #723 : Biochemistry
Which of the following classes of enzymes could possibly breakdown collagen, the most common protein in the human body?
Lipases
Polymerases
Proteases
Isomerases
Ligases
Proteases
Because collagen is a protein, it must be broken down by a protease. Proteases exert their effects by hydrolyzing peptide bonds. The specific enzyme that breaks down collagen, predictably, is called collagenase.
The other classes of enzymes listed have actions unrelated to protein breakdown. An isomerase rearranges bonds to form an isomer, a polyermase adds nucleotides to DNA, a lipase breaks down fats, and a ligase creates a chemical bond.
Example Question #1 : Protein Catabolism
Which of these describe(s) the role of aminotransferases in protein catabolism?
I. They are present in the liver and muscle
II. They transfer the amino group from one amino acids to alpha-ketoglutarate
III. In the muscle, these enzymes move the amino group to glutamate, which can be further converted to glutamine which is a excess nitrogen carrier from tissues
IV. They catalyze irreversible reactions and release amino groups as free ammonium
II and IV
I, II, and III
I and II
II and III
I, II, III, and IV
I, II, and III
Aminotransferases do not release amino groups, but rather transfer them to other amino acids. The reactions catalyzed by aminotransferases are reversible. Their blood concentrations can be used as clinical indicators for damage to liver or muscle.
Example Question #1 : Catabolic Pathways And Metabolism
Which of the following describes the role of glutamine synthetase in protein catabolism?
I. Glutamine synthetase converts glutamate and ammonia to glutamine using one molecule of ATP
II. The reaction catalyzed by glutamine synthetase is reversible
III. The reaction catalyzed by glutamine synthetase removes excess nitrogen (in the form of toxic ammonia) from protein degradation
IV. Glutamine synthetase converts glutamine to glutamate
IV only
I and III
I, II, and III
I and IV
III only
I and III
Glutaminase synthetase is present predominately in the brain, liver and kidneys.The importance of the reaction catalyzed by glutamine synthetase is that excess nitrogen (in the form of toxic ammonia) from protein degradation can be removed from tissues, especially the brain. The reaction catalyzed by glutamine synthetase is irreversible. It converts glutamate to glutamine.
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