Organic Chemistry : Biological Molecules

Study concepts, example questions & explanations for Organic Chemistry

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Example Questions

Example Question #11 : Biological Molecules

The following terpene is classified as which of the following?

Screen shot 2015 11 16 at 11.58.57 am

Possible Answers:

Eicosanoid

Hemiterpene

Monoterpene

Diterpene

Monoterpenoid

Correct answer:

Monoterpene

Explanation:

The molecule's skeletal structure contains two isoprene (2-methylbutyl) units, and therefore the molecule is a monoterpene.

Example Question #12 : Biological Molecules

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Which of these two fatty acids has the lower melting point and why?

Possible Answers:

Alpha-linolenic acid, because it contains more cis double bonds.

Alpha-linolenic acid, because it contains fewer cis double bonds.

They have the same melting point since both have 18 carbons.

Stearic acid, because it contains more cis double bonds.

Stearic acid, because it contains fewer cis double bonds.

Correct answer:

Alpha-linolenic acid, because it contains more cis double bonds.

Explanation:

Fatty acids that contain a higher degree of unsaturation (more alkene bonds) will introduce more "kinks" into the hydrocarbon chain. This "kinked" chain does not stack nicely with other fatty acids of its kind and therefore are more likely to slip past each other at lower temperatures. This is primarily due to the van der Waals forces within the unsaturated fatty acids being disrupted with the introduction of double bonds. As a result, unsaturated fatty acids generally have a lower melting point than saturated fatty acids.

Example Question #1 : Help With Organic Carbohydrates

Chemists and biochemists have many ways of representing sugars. Glucose, the most common hexose, is shown below in various linear and cyclic projections. Using the linear and cyclic projection of your choice, can you indicate which colored oxygen in the linear form corresponds to the circled hemiacetal oxygen once the cyclization reaction is complete?

Q3

Possible Answers:

Green

Yellow

Red

Purple

Blue

Correct answer:

Purple

Explanation:

This answer, regardless of your preference of projection type, is easiest to obtain using arrow pushing for the cyclization reaction to keep track of each carbon and oxygen:

A3

The purple carbon in the linear projection ends in the circled hemiacetal position.

Example Question #2 : Help With Organic Carbohydrates

Which of the following structures represents the anomeric alpha ring structure of D-glucose? 
Linear glucose

Possible Answers:

Alpha galactose

Alpha ribose

Alpha mannose

Alpha fructose

Alpha glucose

Correct answer:

Alpha glucose

Explanation:

When converting a linear sugar to its ring form, a bond is formed between the oxygen attached to carbon 5 and the carbon at position 1. All hydroxyl groups that are not attached to the carbon in position 1 and are oriented to the right end up trans to the  attached to carbon 5, while those that are in the left position end up cis to the  attached to carbon 5.

If the hydroxyl group attached to carbon 1 ends up trans to the  attached to carbon 5, the ring structure is considered alpha. If the hydroxyl group attached to carbon 1 is cis to the  attached to carbon 5, the ring structure is considered beta.

The alpha ring structure of D-glucose bonds the carbon 1 hydroxyl group trans to the carbon 5  group. The hyroxyl groups on carbons 2, 3, and 4 will be trans, cis, and trans with respect to the .

Example Question #3 : Help With Organic Carbohydrates

Which of the following structures represents the anomeric alpha ring structure of D-galactose? 

Linear galactose

Possible Answers:

Alpha ribose

Alpha mannose

Alpha fructose

Alpha galactose

Alpha glucose

Correct answer:

Alpha galactose

Explanation:

When converting a linear sugar to its ring form, a bond is formed between the oxygen attached to carbon 5 and the carbon at position 1. All hydroxyl groups that are not attached to the carbon in position 1 and are oriented to the right end up trans to the  attached to carbon 5, while those that are in the left position end up cis to the  attached to carbon 5.

If the hydroxyl group attached to carbon 1 ends up trans to the  attached to carbon 5, the ring structure is considered alpha. If the hydroxyl group attached to carbon 1 is cis to the  attached to carbon 5, the ring structure is considered beta.

The alpha ring structure of D-galactose bonds the carbon 1 hydroxyl group trans to the carbon 5  group. The hyroxyl groups on carbons 2, 3, and 4 will be trans, cis, and cis with respect to the .

Example Question #4 : Help With Organic Carbohydrates

Which of the following ring structures represents the anomeric alpha ring structure of D-mannose? 

Linear mannose

Possible Answers:

Alpha mannose

Alpha galactose

Alpha glucose

Alpha ribose

Alpha fructose

Correct answer:

Alpha mannose

Explanation:

When converting a linear sugar to its ring form, a bond is formed between the oxygen attached to carbon 5 and the carbon at position 1. All hydroxyl groups that are not attached to the carbon in position 1 and are oriented to the right end up trans to the  attached to carbon 5, while those that are in the left position end up cis to the  attached to carbon 5.

If the hydroxyl group attached to carbon 1 ends up trans to the  attached to carbon 5, the ring structure is considered alpha. If the hydroxyl group attached to carbon 1 is cis to the  attached to carbon 5, the ring structure is considered beta.

The alpha ring structure of D-mannose bonds the carbon 1 hydroxyl group trans to the carbon 5  group. The hyroxyl groups on carbons 2, 3, and 4 will be cis, cis, and trans with respect to the .

Example Question #5 : Help With Organic Carbohydrates

Identify the aldose pictured, including its alpha or beta designation. 

A d mannose

Possible Answers:

-D-glucose

-D-glucose

-D-ribose

-D-mannose

-D-mannose

Correct answer:

-D-mannose

Explanation:

The structure pictured is mannose because the hydroxyl groups at carbons 2, 3, and 4 are situated cis, cis, and trans (respectively) to the  attached to carbon 5.

The mannose pictured is in alpha form because the hydroxyl group at carbon 1 is trans to the  attached to carbon 5.

Example Question #1 : Help With Organic Carbohydrates

The Fischer projection pictured is a form of glucose. The carbon labeled "x" is the chiral carbon farthest away from carbon 1 and the hydroxyl group connected to carbon "x" is on the right. This fact designates that the glucose as what configuration? 

D configuration

Possible Answers:

Alpha

Pyranose

Beta

L

D

Correct answer:

D

Explanation:

The chiral carbon farthest away from carbon 1 is designated as "D" if its hydroxyl group is on the right side in the Fischer projection. In other words, this is D-glucose because the hyroxyl group on carbon "x" is oriented to the right.

Example Question #251 : Biochemistry

What is the name of the aldose pictured in this Fischer projection?

D ribose

Possible Answers:

L-fructose

D-arabinose

L-xylose

D-ribose

L-lyxose

Correct answer:

D-ribose

Explanation:

The structure is D-ribose because it is a five-carbon aldose with the hydroxyl groups on carbons 2, 3, and 4 all on the right in the Fischer projection.

Example Question #1 : Help With Organic Carbohydrates

Which of the following statements is true regarding carbohydrates?

Possible Answers:

In nature, carbohydrates are usually found with a "D" conformation

All of these

The anomeric carbon is the site of attachment from one monosaccharide to another

Aldoses are more common in nature than ketoses

Correct answer:

All of these

Explanation:

All of these statements are true. A carbohydrate is said to have a "D" conformation in its acyclic form when the alcohol group on the carbohydrate's top stereocenter is on the right side in a Fischer projection. Most carbohydrates that we deal with in organic chemistry are aldoses, which means that they contain an aldehyde. The anomeric carbon is the site of attachment from one monosaccharide to another, and can be used to create polysaccharides.

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