GRE Subject Test: Biology : GRE Subject Test: Biology

Study concepts, example questions & explanations for GRE Subject Test: Biology

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Example Questions

Example Question #2 : Understanding Translation

What site in the ribosome contains the elongating polypeptide?

Possible Answers:

E site

R site

A site

P site

Correct answer:

P site

Explanation:

A tRNA that is attached to one amino acid will enter the ribosomal complex at the A site. It will then receive the growing polypeptide chain from the previous tRNA and move into the P site. Once handing off the chain, the tRNA that no longer has an amino acid will exit the ribosome at the E site.

The peptide chain is always anchored in the P site, where peptide bond synthesis occurs.

Example Question #21 : Genetic Sequences, Transcription, And Translation

Which of the following is true concerning the genetic code?

Possible Answers:

One codon can code for multiple amino acids

An amino acid has only one codon

Translation typically ends once the whole mRNA is read by the ribosome

A codon codes for one amino acid

Correct answer:

A codon codes for one amino acid

Explanation:

The genetic code is unambiguous, meaning that each given codon will always code for the same amino acid. An amino acid, however, can be coded for by multiple codons, making the genetic code degenerative in nature. Once a stop codon is reached during translation, the ribosome stops making the protein.

Example Question #171 : Gre Subject Test: Biology

Which of the following post-transcriptional modifications occur in the nucleus?

I. 5' capping

II. Splicing

III. Polyadenylation

Possible Answers:

I, II, and III

I and II

II and III

I and III

Correct answer:

I, II, and III

Explanation:

All of the post-transcriptional modifications listed occur in the nucleus. Each is important in the process of turning pre-mRNA into mature mRNA that can successfully exit the nucleus and enter into translation. These modifications allow for the appropriate recognition by ribosomes and serve to enhance the stability of the mRNA molecule.

The 5' guanosine cap is added to one end of the RNA strand, and a poly-A tail is added to the other. These modifications serve to help with ribosome recognition and prevent degradation. Spicing involves the removal of non-coding introns from the RNA transcript, allowing for translation of the proper sequence.

Example Question #172 : Gre Subject Test: Biology

Which of the following post-translation modifications cannot be classified as lipidation?

Possible Answers:

Myristoylation

Ubiquitination 

Palmityolation

Prenylation

Addition of GPI-anchor

Correct answer:

Ubiquitination 

Explanation:

Ubiquitination is the only option in which the modification to the protein does not include the binding of a lipid group to a protein. Rather, it is the addition of another peptide to the existing protein.

Example Question #173 : Gre Subject Test: Biology

The process of polyadenylation results in the addition of a poly-A tail to mRNA after transcription. The poly-A tail consists of approximately 150-200 adenine bases at the 3' end of the mRNA. Which of the following best describes the purpose of polyadenylation in mRNA processing?

Possible Answers:

Initiation of transcription

Protection against degradation in the cytoplasm

Transport of mRNA into the nucleus

Coupling mRNA to the spliceosome

Enhancement of intron splicing

Correct answer:

Protection against degradation in the cytoplasm

Explanation:

Polyadenylation results in a long chain of adenosine monophosphate residues being added to the 3' end of a pre-mRNA as transcription is terminating. The poly-A tail provides stability to the mRNA molecule as it is transported through the cell to its ultimate location. Without this modification, the shorter mRNA would be degraded by enzymes within the cytoplasm. The other functions listed as answers are in no part dependent on the poly-A tail. 

Example Question #174 : Gre Subject Test: Biology

Which of the following post-translational modifications has most typically been associated with protein degradation via activation of the cell's proteasome system? 

Possible Answers:

Gamma-carboxylation

Palmitoylation

Acylation

Ubiquitination

Lipoylation

Correct answer:

Ubiquitination

Explanation:

Conjugation of ubiquitin molecules to a protein activates the ubiquitin proteasome system, which is required by cells to break down proteins into their component amino acid residues to be reallocated in protein building as necessary. While the other modifications may contribute to some degradation pathway, ubiquitin is classically considered a marker of protein destruction via the proteasome system. 

Example Question #174 : Gre Subject Test: Biology

__________ is the addition of a long tail of adenine bases to an mRNA during mRNA processing, and this step is crucial for the stability of the mRNA as it gets exported to other parts of the cell.

Possible Answers:

5' capping

Methylation

Ribonucleation

Polyadenylation

mRNA splicing

Correct answer:

Polyadenylation

Explanation:

Polyadenylation is the process in which a "Poly-a tail," or a tail of adenine bases, is added to the 3' end of an mRNA. The other processes listed do not carry out this function.

Example Question #175 : Gre Subject Test: Biology

Which of the following is not an example of an epigenetic cause of trait variation? 

Possible Answers:

Imprinting

X-chromosome inactivation 

Histone acetytlation 

DNA methylation

Different exon sequences

Correct answer:

Different exon sequences

Explanation:

Epigenetics are changes to the genome that result in phenotypic variation that have nothing to do with changes in the actual DNA sequence. All listed answers occur independently of DNA sequence, except for "different exon sequences," which is the actual sequence of an exon. This referces to alternative splicing, an is not related to the modification of DNA or histones.

Example Question #176 : Gre Subject Test: Biology

Which of the following is true about the effects of epigenetics on gene expression? 

Possible Answers:

Modification of chromatin lysine residues alters gene expression by changing the affinity between DNA and chromatin

Modification of histone lysine residues alters gene expression by changing the affinity between DNA and histones

Modification of histone arginine residues alters gene expression by changing the affinity between DNA and histones

None of the other answers 

Modification of nucleosome lysine residues alters gene expression by changing the affinity between DNA and histones

Correct answer:

Modification of histone lysine residues alters gene expression by changing the affinity between DNA and histones

Explanation:

Methylation and acetylation of histones occurs on lysine residues, thereby decreasing or increasing gene expression, respectively. Methylation increases the affinity for histones and DNA, where acetylation decreases the affinity for histones and DNA. Gene expression is in part controlled by modification of histone proteins, rather non-histone chromosomal proteins. 

Example Question #2 : Understanding Epigenetics

In terms of epigenetics, acetylated histones usually result in which of the following?

Possible Answers:

Increase in DNA - lamina association

Increase in transcription/ gene expression

Decrease in DNA - lamina association 

Production and assembly of ribosomes

Decrease in transcription/ gene expression

Correct answer:

Increase in transcription/ gene expression

Explanation:

The correct answer is an increase in gene expression. Histone acetylation removes positive charges on the histones, reducing the affinity of DNA for histones. Remember that DNA is negatively charged due to the phosphate groups on its backbone. DNA and histones are attracted to each other because histones are positively charged due to being rich in basic amino acid residues. Acetylation relaxes the tightly bound DNA allowing transcription factors to bind promoter regions. DNA deacetylation and methylation supress gene transcription by making DNA and histones associate more tightly together, decreasing the ability of transcription factors and/or RNA polymerase to bind the DNA. Histone modifications such as acetylation, deacetylation, and methylation do not directly affect the amount of DNA. If a histone is acetylated on a part of the DNA which codes for the genes for ribosome production, then an increase in ribosomal production and assembly could occur, but genes coding for ribosomes are greatly outnumbered by other genes, and thus, this is not the usual result of acetylating histones. 

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