AP Biology : Identify structure and purpose of carbohydrates, lipids, proteins, and nucleic acids

Study concepts, example questions & explanations for AP Biology

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Example Questions

Example Question #2511 : Ap Biology

A reaction between an alpha-carboxylic acid and an alpha-amino group creates a peptide bond. Which of the following describes this process?

Possible Answers:

Hydrogenation

Hydrolysis

Esterification

Dehydration synthesis

Correct answer:

Dehydration synthesis

Explanation:

Hydrolysis reactions involve breakdown of molecules (lysis) in the presence of water. Water is a reactant in hydrolysis reactions. Dehydration synthesis reactions involve formation of bonds between molecules (synthesis) and removal of water at the end of the reaction (dehydration). Water is a product in dehydration synthesis reactions.

During the formation of peptide bonds a hydroxyl group from carboxylic acid and a hydrogen atom from the amino group are released and form water. Formation of peptide bonds is a dehydration synthesis reaction because bonds are synthesized and water is released.

Formation and destruction of bonds within macromolecules always involve a hydrolysis or a dehydration synthesis reaction. Esterification and hydrogenation reaction refer to other organic chemistry processes.

Example Question #121 : Biochemical Concepts

Which of the following will be found in every protein in the human body?

Possible Answers:

Disulfide bridges

Phosphodiester bonds

Hydrogen bonding

Aldehyde groups

Glycine

Correct answer:

Hydrogen bonding

Explanation:

Proteins are made up of amino acids that undergo a series of dehydration reactions, which link them together to form the primary structure of a protein. Amino acids are linked together by peptide bonds, while nucleic acids are linked via phosphodiester bonds. The secondary structure of the protein is formed by hydrogen bonding between the amino acid backbones. Every protein will have primary and secondary structure, and thus will have hydrogen bonding.

Disulfide bridges help to construct tertiary structure, but only occur between cysteine residues. Cysteine will not necessarily be present in every protein, and there are some proteins that cannot form disulfide bridges. Similarly, not all proteins will contain glycine.

Aldehyde groups are frequently found in carbohydrates, but do not often appear in proteins.

Example Question #2512 : Ap Biology

Disulfide bonds are associated with which of the following?

Possible Answers:

Cysteine residues and quaternary structure

Cysteine residues and tertiary structure

Arginine residues and tertiary structure

Arginine residues and quaternary structure

Arginine residues and secondary structure

Correct answer:

Cysteine residues and tertiary structure

Explanation:

Whenever you think about disulfide bonds you should think about cysteine. Cysteine contains a sulfur atom in a sulfhydryl group that is capable of forming a disulfide bridge with another sulfur atom in another cysteine residue. These disulfide bridges contribute to the overall three-dimensional structure of the protein, namely the tertiary structure).

Quaternary structure results from the joining of multiple polypeptide subunits and is driven by hydrophobic interactions. Tertiary structure is also driven by hydrophobic interactions, but also relies on intermolecular forces between amino acid function groups, such as the cysteine sulfhydryl.

Example Question #62 : Identify Structure And Purpose Of Carbohydrates, Lipids, Proteins, And Nucleic Acids

Pharmaceutical researchers are often interested in blocking particular receptor proteins on cell surfaces. What chemical property of a molecule would be most important for it to bind a receptor active site?

Possible Answers:

The type of bonding in the molecule

The molecule's structural shape

The number of valence electrons in the molecule

The molecule's chemical formula

The number of double bonds in the molecule

Correct answer:

The molecule's structural shape

Explanation:

To block a receptor protein, a molecule must structurally resemble the natural ligand. The active sites of proteins are highly specific, and will only bind certain molecules. The chemical formula, electrons, and bonding in the molecule can all influence small regions of the molecule's structure, but the overall shape must ultimately match the active site of the target protein.

Example Question #2511 : Ap Biology

Which of these is not a major function of proteins in the body?

Possible Answers:

Transport biological macromolecules

Send biological signals to distant parts of the body

Primary component of cellular membrane

Catalyze cellular reactions

Facilitate muscle contraction

Correct answer:

Primary component of cellular membrane

Explanation:

Though proteins may be found on the cellular membrane, they are not a primary component. The cell membrane is known as the "phospholipid bilayer," as it is primarily composed of a double layer of lipids. Proteins may be attached to the surface or fully integrated into the bilayer, and serve as a means of signaling, transport, and adhesion.

Proteins are a primary component of the endocrine system, and several signaling hormones are made of peptides. The proteins action and myosin are directly involved in muscle contraction and for the structural basis of the sarcomere. Enzymes are a special class of catalytic proteins. Chaperone proteins and ion channels help transport molecules through the body; many nonpolar molecules must bind to a protein to travel through the blood.

Example Question #64 : Identify Structure And Purpose Of Carbohydrates, Lipids, Proteins, And Nucleic Acids

Which of the following is true regarding enzymes?

Possible Answers:

Enzymes cause chemical reactions to slow down using cofactors

All enzymes are made up of lipids

Enzymes are not involved in DNA synthesis

Enzymes decrease the activation energy of a reaction by lowering the energy of the transition state

Enzymes increase the activation energy of a reaction by lowering the energy of the transition state

Correct answer:

Enzymes decrease the activation energy of a reaction by lowering the energy of the transition state

Explanation:

An enzyme lowers the energy of the transition state, which makes the chemical reaction proceed faster. Enzymes speed up many chemical reactions in processes like DNA synthesis and glycolysis. They are also proteins, so they're composed of amino acids.

Example Question #2513 : Ap Biology

Polymers of amino acids are __________.

Possible Answers:

polysaccharides

polypeptides

proteins

cellulose

Correct answer:

polypeptides

Explanation:

Polypeptides are are polymers of amino acids. Proteins consist of one or more polypeptide chains folded in a certain shape. Polysaccharides are polymers of monosaccharides and do not contain amino acids. Cellulose is a polysaccharide that is a major component of plant cell walls.

Example Question #61 : Identify Structure And Purpose Of Carbohydrates, Lipids, Proteins, And Nucleic Acids

Which of the following levels of protein structure is defined as the sequence of amino acids?

Possible Answers:

Quaternary structure

Secondary structure

Tertiary structure

Primary structure

Correct answer:

Primary structure

Explanation:

The amino acid sequence is the primary structure of a protein, which is held together by peptide bonds. The secondary structure involves hydrogen bonding between the backbones of amino acids. Tertiary structure describes the unique folding pattern of a polypeptide as a result of intermolecular forces such as hydrogen bonds, hydrophobic interactions and covalent bonds such as disulfide bridges. Tertiary structure is the result of the amino acid side chains interacting with each other. Quaternary structure is the interaction of two or more polypeptide chains with each other.

Example Question #62 : Identify Structure And Purpose Of Carbohydrates, Lipids, Proteins, And Nucleic Acids

Which of the following are made of protein? 

Possible Answers:

Steroids

Enzymes

Starch

Triacylglycerols

Cholesterol 

Correct answer:

Enzymes

Explanation:

Steroids fall into the lipid category, characterized by a carbon skeleton composed of four fused rings  Cholesterol is a type of steroid; it is synthesized in the liver, and is necessary for the production of sex hormones. Triacylglycerol is also a type of lipid, composed of three fatty acid molecules and a glycerol (also known as a triglyceride). Starch is a polymer of glucose monomers. Its primary function is to store energy. A protein is a molecule that is composed of polypeptides, folded into a 3D structure. Each protein is composed of a combination of amino acids. Proteins make up over 50% of dry mass of a cell and have many different functions like speeding up chemical reactions, defense, storage, transport, cellular communication, movement, and structural support. Enzymes are types of proteins that speed up chemical reactions, and are never consumed during reactions.

Example Question #132 : Biochemical Concepts

Proteins consist of a primary, secondary, tertiary, and sometimes a quaternary structure. The primary structure describes the protein’s amino acid sequences bonded together via peptide bonds. The secondary structure describes the protein’s folding pattern dictated by the hydrogen bonds. In the secondary structure, the two common formations are in the alpha or beta comfirmation. The tertiary structure describes the three dimensional structure of the protein that is formed by the following interactions: hydrogen bonding, hydrophobic interactions, van der Waal’s interactions, and electrostatic interactions between the R groups of the amino acids. These various interactions allow the protein to fold into a globular formation. Finally, the quaternary structure describes how multiple globular proteins can interact with each other to form a multi-subunit protein.

Drug X is able to disrupt the amino acids sequence. Which of the following protein structures will be altered by Drug X?

Possible Answers:

Only the secondary structure will be disrupted

Only the primary structure will be disrupted

Only the tertiary structure will be disrupted

All four levels of protein structure will be disrupted

Only the quaternary structure will be disrupted

Correct answer:

All four levels of protein structure will be disrupted

Explanation:

All of the protein structures will be altered and disrupted. Drug X disrupts the amino acid sequences in the primary structure of the protein. The primary structure acts as the protein’s blueprint. It can be concluded that if the primary sequence is altered, all of the subsequent structures will be disrupted as well. The sequence of amino acids encode for the protein’s particular shape and function; disrupting the code will change the shape and function of the primary, secondary, tertiary, and quaternary structures of the protein.

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