AP Biology : AP Biology

Study concepts, example questions & explanations for AP Biology

varsity tutors app store varsity tutors android store

Example Questions

Example Question #7 : Understand Steps Of Replication

What is the purpose of polymerase chain reaction (PCR)?

Possible Answers:

Increase the efficiency of translation

Isolate tagged proteins

Amplify a template DNA

Amplify a template RNA

Correct answer:

Amplify a template DNA

Explanation:

Polymerase chain reaction, or PCR, is commonly used in laboratories to increase the amount of a small biological sample. Given a small sample of DNA, the process replicates the sample to make numerous identical copies. These copies can then be studied directly, used to make protein products, or incorporated into genetic modification.

Other laboratory techniques can be used to achieve the results given by the other answer options.

Example Question #8 : Understand Steps Of Replication

What is the purpose topoisomerase during DNA replication?

Possible Answers:

Identify unwanted isomers of nucleotides 

Bring new nucleotides to the replication fork

Cut the phosphate backbone ahead of the replication fork to prevent the DNA from getting overwound

Hold the DNA polymerases in place during replication

Correct answer:

Cut the phosphate backbone ahead of the replication fork to prevent the DNA from getting overwound

Explanation:

DNA topoisomerases are the cell's solution to the "winding" problem. The double helical nature of DNA results in tension during the replication process that would interfere with the process. DNA topoisomerases cut the phosphate backbone to relieve this tension, and allow DNA to replicate properly.

Example Question #9 : Understand Steps Of Replication

What would be a direct result of a mutated, nonfunctional gene for primase in a cell?

Possible Answers:

Inability to replicate DNA

Inability to maintain genetic fidelity

Inability to transcribe DNA

Inability to denature double-stranded DNA

Correct answer:

Inability to replicate DNA

Explanation:

Primase is an enzyme that is essential for the process of DNA replication. It synthesizes RNA primers so that DNA polymerase may begin replicating DNA. Mutation to the gene that codes for primase would damage the protein. Without primase, a cell would not be able to go through the process of replication because DNA polymerase would not properly bind the DNA.

RNA polymerase is responsible for transcribing DNA and helicase is responsible for unwinding the DNA double stranded helix.

Example Question #2321 : Ap Biology

Why must there be a lagging strand during DNA synthesis?

Possible Answers:

The lagging strand helps conserve energy

DNA is a polyanion

The lagging strand ensures replication of both strands occurs at a similar rate

DNA is antiparallel 

Correct answer:

DNA is antiparallel 

Explanation:

The lagging strand exists because DNA is antiparallel and replication always occurs in the 5' to 3' direction. One strand of DNA will be replicated in the 5' to 3' direction toward the replication fork, following in the same direction as the DNA is "unzipped." This is the leading strand, which can be replicated fluidly. The lagging strand is oriented in the 3' to 5' direction, and must be read backward (away from the replication fork).

Having a lagging strand does not help the cell conserve energy. DNA is a polyanion, but this is due to the phosphate groups in the backbone. If anything, having a lagging strand actually makes it more difficult to maintain a similar rate of replication between strands since they cannot be replicated in the same direction.

Example Question #2322 : Ap Biology

What are Okazaki fragments?

Possible Answers:

DNA that has been cleaved by nucleases

Short fragments of DNA synthesized on the lagging strand

Small fragments of RNA used to silence genes

Small proteins used to prevent DNA fragments from reannealing

Correct answer:

Short fragments of DNA synthesized on the lagging strand

Explanation:

Okazaki fragments are the cell’s solution to replicating DNA in the opposite direction of the replication fork. They are small fragments of DNA synthesized on the lagging strand. While the leading strand can be continuously synthesized toward the replication fork, the lagging strand must be made in small pieces opposite from the replication fork.

Using small fragments of RNA to silence genes is a process known as RNA interference. DNA that has been cleaved by nucleases is not related to Okazaki fragments. Single-strand binding proteins are small proteins used to prevent DNA from reannealing during replication.

Example Question #2323 : Ap Biology

What is the function of DNA ligase?

Possible Answers:

Synthesize RNA primers

Create phosphodiester bonds 

Separate double-stranded nucleic acids

Transcribe DNA into RNA

Correct answer:

Create phosphodiester bonds 

Explanation:

DNA ligase is an enzyme responsible for repairing nicks in the sugar-phosphate backbone of DNA and for fusing Okazaki fragments during DNA replication. It accomplishes this task by resynthesizing the phosphodiester bonds that hold the backbone together

The other answers describe the functions of other proteins involved in DNA replication or DNA transcription. Helicase is responsible for unwinding double-stranded nucleic acids and is essential for producing the replication fork during DNA synthesis. Primase synthesizes RNA primers as attachment points for DNA polymerase during replication. RNA polymerase is responsible for transcribing a DNA template into RNA products.

Example Question #2324 : Ap Biology

Which term best describes DNA replication?

Possible Answers:

Conservative

Dispersive

Random

Semiconservative

Correct answer:

Semiconservative

Explanation:

DNA is replicated in a semiconservative manner. This implies that each parental strand serves as the template for a newly replicated strand. Each daughter DNA helix is thus composed of one complete parental strand and one complete new strand.

Parent: (PP)

Replication: (PD)(DP)

The other answer choices refer to other theories of DNA replication, which have since been proven incorrect.

Conservative replication results in a newly synthesized molecule of DNA that does not contain either parental strand. Each daughter helix would be composed of only parental strands or only new strands.

Parent: (PP)

Replication: (PP)(DD)

Random and dispersive actually refer to the same process, and imply that DNA is replicated such that the resulting strands are made up of bits and pieces of both newly replicated DNA and the parental DNA. Neither strand is fully conserved in this theory of replication, and instead two hybrid strands are produced.

Example Question #2325 : Ap Biology

Which base pair sequences would you expect to find near the replication origin? 

Possible Answers:

Adenine and thymine

Guanine and cytosine

Guanine and thymine

Adenine and guanine

Cytosine and adenine

Correct answer:

Adenine and thymine

Explanation:

An adenine-thymine sequence would be more likely to be found near the replication origin. Adenine and thymine pair with two hydrogen bonds, while cytosine and guanine pair with three hydrogen bonds. This makes adenine and thymine regions easier to break apart. Since helicase must break the hydrogen bonds in order to create the replication fork at the replication origin, it makes sense that this event would occur in a region where there were weaker forces between the two DNA strands.

Remember, guanine always pairs with cytosine and adenine always pairs with thymine.

Example Question #2326 : Ap Biology

A random mutation occurs in the DNA of a cell, altering one of the enzymes necessary for DNA replication and making it nonfunctional. As a result, the DNA remains supercoiled, preventing replication from taking place. Which enzyme has been altered?

Possible Answers:

Topoisomerase

DNA helicase

DNA polymerase

DNA ligase

Telomerase

Correct answer:

Topoisomerase

Explanation:

The role of the topoisomerase enzyme is to unwind the DNA, allowing enzymes such as DNA helicase access to the nucleotide sequence. DNA helicase is responsible for breaking the hydrogen bonds responsible for holding double-stranded DNA together. This creates the replication fork and allows DNA polymerase access to the nitrogenous base sequence. The role of DNA polymerase is to place nucleotides once the DNA has been unwound, synthesizing the daughter DNA strands. DNA ligase binds nucleotide fragments together during synthesis. Telomerase is responsible for lengthening the telomeres at the ends of chromosomes.

Example Question #2327 : Ap Biology

Which of the following proteins is responsible for the fusing of Okazaki fragments?

Possible Answers:

DNA polymerase

Helicase

Primase

RNA polymerase

DNA ligase

Correct answer:

DNA ligase

Explanation:

Okazaki fragments are found on the lagging strand during replication. Because these fragments will not be attached together following strand synthesis, a protein is required to combine the fragments. DNA ligase will follow DNA polymerase on the lagging strand, and combine the fragments in order to create a complete strand.

DNA polymerase is responsible for recruiting and joining nucleotides in the 3'-to-5' direction, but cannot fuse Okazaki fragments on the lagging strand. Primase lays down an RNA primer to recruit DNA polymerase prior to replication. Helicase unwinds the DNA helix in order to expose the template strands. RNA polymerase is involved in transcription, and plays no active role in DNA replication.

Learning Tools by Varsity Tutors