AP Biology : Biochemical Concepts

Study concepts, example questions & explanations for AP Biology

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Example Questions

Example Question #141 : Biochemical Concepts

The covalent bond that links two amino acids together is called __________.

Possible Answers:

an amino linkage

a phosphodiester bond

an ester bond

a peptide bond

Correct answer:

a peptide bond

Explanation:

The covalent bond between two amino acids is called a peptide bond. This is formed by positioning two amino acids so the carboxyl group of one is adjacent to the amino group of another. An enzyme then joins the two via a dehydration synthesis reaction. Ester bonds link fatty acids to glycerol heads, and phosphodiester bonds are formed between the sugar and phosphate backbone of a nucleic acid.

Example Question #2522 : Ap Biology

The unique sequence of amino acids in a protein is its __________.

Possible Answers:

quaternary structure

tertiary structure

secondary structure

primary structure

Correct answer:

primary structure

Explanation:

The primary structure of a protein is its amino acid sequence. The coils and folds of a protein are its secondary structure. Irregular contortions in the protein structure due to interactions between amino acid side chains is the tertiary structure. The overall structure when two or more polypeptides aggregated is the quaternary structure.  

Example Question #2523 : Ap Biology

The unique three-dimensional shape of a protein is called its __________.

Possible Answers:

primary structure

sequence

molecular weight

conformation

peptide configuration

Correct answer:

conformation

Explanation:

Conformation is the the term for the three dimensional structure of proteins. Though the types of proteins are incredibly diverse they are all polymers made up of the same set of 20 amino acids. A protein's molecular weight involves the sum of all the atoms and their abundances, molecular weight is often used to approximate the size of a protein when determining if it will pass through a pore or channel in a membrane. The amino acid sequence is the primary structure, and is held together by peptide bonds.

Example Question #111 : Macromolecules

Disulfide bonds may be formed in a protein's __________.

Possible Answers:

Two of these.

quaternary structure

secondary structure

tertiary structure

Correct answer:

Two of these.

Explanation:

Disulfide bonds may be formed in both tertiary and/or quaternary structures of a protein. These bonds result from the oxidation of the R-group (side chain) of the amino acid cysteine.

Example Question #2531 : Ap Biology

Which of the following protein structures is determined by its amino acid sequence?

Possible Answers:

Tertiary structure

Primary structure

None of these

Quaternary structure

Secondary structure

Correct answer:

Primary structure

Explanation:

The linear sequence of amino acids in a polypeptide chain gives rise to the protein's primary structure.

Example Question #142 : Biochemical Concepts

At which level of protein structure does the formation of disulfide bridges occur?

Possible Answers:

Tertiary structure

Two of these

Primary structure

Quaternary structure

Secondary structure

Correct answer:

Two of these

Explanation:

The formation of disulfide bridge occurs in the tertiary and/or quaternary level of protein structure. This involves two sulfur atoms sharing a lone pair of electrons to form a covalent bond, which enhances the integrity of the protein's structure. The amino acid that is involved in forming disulfide bridges is cysteine.

Example Question #2531 : Ap Biology

Which of the following is true of proteins?

Possible Answers:

Proteins are made up of nucleotides.

Proteins consist of carbon, hydrogen, and oxygen.

Proteins are polymers of molecules called amino acids.

Proteins are made up of glycerol and fatty acid chains.

Correct answer:

Proteins are polymers of molecules called amino acids.

Explanation:

Proteins consist of the elements nitrogen, carbon, hydrogen, and oxygen.  They are polymers of molecules called amino acids.  Lipids are made up of glycerol and fatty acid chains.

Example Question #2532 : Ap Biology

What is the part of an amino acid that makes it different compared to other amino acids?

Possible Answers:

Amino group

Carboxyl group

The side chain called the R-group.

glycerol

Correct answer:

The side chain called the R-group.

Explanation:

All amino acids have an amino group and a carboxyl group.  Amino acids do not have glycerol.  The side chain called an R-group is what differentiates amino acids from each other in their chemical properties and functions.

Example Question #2532 : Ap Biology

Which two protein structure takes advantage of hydrogen bonding, ionic bonds, hydrophobic interactions, and van der Waals interactions?

Possible Answers:

Primary Structure and Secondary Structure

Secondary Structure and Tertiary Structure

Primary Structure and Quaternary Structure 

Quaternary Structure and Tertiary Structure

Tertiary Structure and Primary Structure

Correct answer:

Quaternary Structure and Tertiary Structure

Explanation:

Primary structure takes advantage of covalent bonding to form a peptide bond between amino acids. Secondary structure takes advantage of hydrogen bonding to form alpha helices and beta-pleated sheets. The tertiary structure takes advantage of all these forms of bonding and interactions to fold into the overall shape of the protein and the quaternary structure is formed by using these interactions to connect multiple polypeptides.

Example Question #2533 : Ap Biology

Which of the following is not a possible function of a protein?

Possible Answers:

Aid in intercellular communication

Maintaining cell structure

Storing energy for the body

Transporting molecules into or out of a cell

Catalyzing biochemical reactions

Correct answer:

Storing energy for the body

Explanation:

Proteins preform multiple functions in the body. Carrier proteins move molecules from place to place. Sometimes the molecules they carry relay signals between cells. Proteins can bind to substrates to bring the ingredients of key reactions together, catalyzing those reactions. Certain proteins integrate into cell membranes providing structural elements. Fatty acids store energy, while proteins do not. They lack the highly reduced carbon-hydrogen bonds of fatty acids. 

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